A B C D E F G H I J K L M N O P Q R S T U V W X Y Z

A

ABox - Class in org.mindswap.pellet
Title:
ABox(KnowledgeBase) - Constructor for class org.mindswap.pellet.ABox
 
ABox(KnowledgeBase, ABox, ATermAppl, boolean) - Constructor for class org.mindswap.pellet.ABox
 
ABoxStats - Class in org.mindswap.pellet
Title:
ABoxStats() - Constructor for class org.mindswap.pellet.ABoxStats
 
abs - Static variable in class com.clarkparsia.pellet.rules.builtins.NumericOperators
 
absorb() - Method in class org.mindswap.pellet.tbox.impl.TBoxExpImpl
 
absorb() - Method in class org.mindswap.pellet.tbox.impl.TgBox
 
absorbRule(Set<ATermAppl>, Set<ATermAppl>) - Method in class org.mindswap.pellet.tbox.impl.RuleAbsorber
 
AbstractABoxEngineWrapper - Class in com.clarkparsia.pellet.sparqldl.engine
Title: Abstract class for all purely ABox engines.
AbstractABoxEngineWrapper() - Constructor for class com.clarkparsia.pellet.sparqldl.engine.AbstractABoxEngineWrapper
 
AbstractBaseDatatype<T> - Class in com.clarkparsia.pellet.datatypes
Title: Abstract base datatype type
AbstractConceptCache - Class in org.mindswap.pellet.tableau.cache
Title:
AbstractConceptCache(int) - Constructor for class org.mindswap.pellet.tableau.cache.AbstractConceptCache
Creates an empty cache with at most maxSize elements which are neither named or negations of names.
AbstractDateTimeValueSpace - Class in org.mindswap.pellet.datatypes
 
AbstractDateTimeValueSpace(IDateTimeValueType, IDateTimeValueType, XSDatatype) - Constructor for class org.mindswap.pellet.datatypes.AbstractDateTimeValueSpace
 
AbstractDefinitionOrder - Class in org.mindswap.pellet.taxonomy
 
AbstractDefinitionOrder(KnowledgeBase, Comparator<ATerm>) - Constructor for class org.mindswap.pellet.taxonomy.AbstractDefinitionOrder
 
AbstractDerivedIntegerType - Class in com.clarkparsia.pellet.datatypes.types.real
Title: Abstract derived integer type
AbstractDerivedIntegerType(ATermAppl, Number, Number) - Constructor for class com.clarkparsia.pellet.datatypes.types.real.AbstractDerivedIntegerType
 
AbstractIntSet - Class in org.mindswap.pellet.utils.intset
Title:
AbstractIntSet() - Constructor for class org.mindswap.pellet.utils.intset.AbstractIntSet
 
AbstractModuleExtractor - Class in com.clarkparsia.modularity
Title:
AbstractModuleExtractor() - Constructor for class com.clarkparsia.modularity.AbstractModuleExtractor
 
AbstractModuleExtractor(LocalityEvaluator) - Constructor for class com.clarkparsia.modularity.AbstractModuleExtractor
 
AbstractProgressMonitor - Class in org.mindswap.pellet.utils.progress
Title:
AbstractProgressMonitor() - Constructor for class org.mindswap.pellet.utils.progress.AbstractProgressMonitor
 
AbstractProgressMonitor(int) - Constructor for class org.mindswap.pellet.utils.progress.AbstractProgressMonitor
 
AbstractTableauRule - Class in org.mindswap.pellet.tableau.completion.rule
Title:
AbstractTableauRule(CompletionStrategy, NodeSelector, AbstractTableauRule.BlockingType) - Constructor for class org.mindswap.pellet.tableau.completion.rule.AbstractTableauRule
 
AbstractTimelineDatatype - Class in com.clarkparsia.pellet.datatypes.types.datetime
 
AbstractTimelineDatatype(ATermAppl, QName) - Constructor for class com.clarkparsia.pellet.datatypes.types.datetime.AbstractTimelineDatatype
 
AbstractValueSpace - Class in org.mindswap.pellet.datatypes
 
AbstractValueSpace(Object, Object, Object, boolean) - Constructor for class org.mindswap.pellet.datatypes.AbstractValueSpace
 
accept(NumericVisitor) - Method in class com.clarkparsia.pellet.rules.builtins.NumericPromotion
 
accept(AtomObjectVisitor) - Method in class com.clarkparsia.pellet.rules.model.AtomDConstant
 
accept(AtomObjectVisitor) - Method in class com.clarkparsia.pellet.rules.model.AtomDVariable
 
accept(AtomObjectVisitor) - Method in class com.clarkparsia.pellet.rules.model.AtomIConstant
 
accept(AtomObjectVisitor) - Method in class com.clarkparsia.pellet.rules.model.AtomIVariable
 
accept(AtomObjectVisitor) - Method in interface com.clarkparsia.pellet.rules.model.AtomObject
 
accept(RuleAtomVisitor) - Method in class com.clarkparsia.pellet.rules.model.BuiltInAtom
 
accept(RuleAtomVisitor) - Method in class com.clarkparsia.pellet.rules.model.ClassAtom
 
accept(RuleAtomVisitor) - Method in class com.clarkparsia.pellet.rules.model.DataRangeAtom
 
accept(RuleAtomVisitor) - Method in class com.clarkparsia.pellet.rules.model.DatavaluedPropertyAtom
 
accept(RuleAtomVisitor) - Method in class com.clarkparsia.pellet.rules.model.DifferentIndividualsAtom
 
accept(RuleAtomVisitor) - Method in class com.clarkparsia.pellet.rules.model.IndividualPropertyAtom
 
accept(RuleAtomVisitor) - Method in interface com.clarkparsia.pellet.rules.model.RuleAtom
 
accept(RuleAtomVisitor) - Method in class com.clarkparsia.pellet.rules.model.RuleAtomImpl
 
accept(RuleAtomVisitor) - Method in class com.clarkparsia.pellet.rules.model.SameIndividualAtom
 
accept(ResultBinding) - Method in interface com.clarkparsia.pellet.sparqldl.model.Filter
 
accept(ResultBinding) - Method in class com.clarkparsia.pellet.sparqldl.model.MultiFilterWrapper
 
accept(File) - Method in class org.mindswap.pellet.utils.PatternFilter
 
acceptable(Class<? extends Number>) - Static method in class com.clarkparsia.pellet.datatypes.OWLRealUtils
 
accepts(List<T>) - Method in class org.mindswap.pellet.utils.fsm.TransitionGraph
 
add(int, ATermAppl) - Method in interface com.clarkparsia.pellet.BranchEffectTracker
Record that a node is affected by a branch
add(int, ATermAppl) - Method in class com.clarkparsia.pellet.impl.SimpleBranchEffectTracker
 
add - Static variable in class com.clarkparsia.pellet.rules.builtins.NumericOperators
 
add(TermTuple) - Method in class com.clarkparsia.pellet.rules.rete.AlphaIndex
 
add(Fact) - Method in class com.clarkparsia.pellet.rules.rete.AlphaNode
 
add(List<S>, T) - Method in class com.clarkparsia.pellet.rules.rete.Index
Add an object to the index.
add(BetaNode) - Method in class com.clarkparsia.pellet.rules.rete.Node
Add a directly dependent beta node.
add(ResultBinding) - Method in class com.clarkparsia.pellet.sparqldl.model.MultiQueryResults
Adds a new binding to the query result.
add(QueryAtom) - Method in interface com.clarkparsia.pellet.sparqldl.model.Query
Adds an query atom to the query.
add(QueryAtom) - Method in class com.clarkparsia.pellet.sparqldl.model.QueryImpl
Adds an query atom to the query.
add(ATermAppl, ATermAppl) - Method in class com.clarkparsia.pellet.sparqldl.model.QueryParameters
 
add(ResultBinding) - Method in interface com.clarkparsia.pellet.sparqldl.model.QueryResult
Adds a new binding to the query result.
add(ResultBinding) - Method in class com.clarkparsia.pellet.sparqldl.model.QueryResultImpl
Adds a new binding to the query result.
add(T) - Method in class com.clarkparsia.pellet.utils.IdentityHashSet
add(Map<K, Set<V>>, K, V) - Static method in class com.clarkparsia.pellet.utils.MultiMapUtils
 
add(ATermAppl) - Method in class com.clarkparsia.pellet.utils.OntBuilder
 
add(String, List<String>) - Method in class com.clarkparsia.pellint.rdfxml.RDFLints
 
add(RDFModel) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
add(Model) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
add(ABoxStats) - Method in class org.mindswap.pellet.ABoxStats
 
add(int) - Method in class org.mindswap.pellet.DependencySet
Add the integer value b to this DependencySet.
add(Graph, Node, Node, Node) - Static method in class org.mindswap.pellet.jena.graph.converter.TripleAdder
 
add(Graph, Node, Resource, Node) - Static method in class org.mindswap.pellet.jena.graph.converter.TripleAdder
 
add(Graph, Node, Resource, RDFNode) - Static method in class org.mindswap.pellet.jena.graph.converter.TripleAdder
 
add(Graph, Resource, Resource, RDFNode) - Static method in class org.mindswap.pellet.jena.graph.converter.TripleAdder
 
add(List) - Method in class org.mindswap.pellet.output.TableData
 
add(QueueElement, NodeSelector) - Method in class org.mindswap.pellet.tableau.completion.queue.BasicCompletionQueue
 
add(QueueElement) - Method in class org.mindswap.pellet.tableau.completion.queue.BasicCompletionQueue
 
add(QueueElement, NodeSelector) - Method in class org.mindswap.pellet.tableau.completion.queue.CompletionQueue
Add an element to the queue
add(QueueElement) - Method in class org.mindswap.pellet.tableau.completion.queue.CompletionQueue
Add an element to all queues
add(QueueElement, NodeSelector) - Method in class org.mindswap.pellet.tableau.completion.queue.OptimizedBasicCompletionQueue
 
add(QueueElement) - Method in class org.mindswap.pellet.tableau.completion.queue.OptimizedBasicCompletionQueue
 
add(BinarySet<ATermAppl>, ATermAppl, Set<ATermAppl>) - Method in class org.mindswap.pellet.tbox.impl.BinaryTBox
 
add(ATermAppl, ATermAppl, Set<ATermAppl>) - Method in class org.mindswap.pellet.tbox.impl.PrimitiveTBox
 
add(ATermAppl, ATermAppl, Set<ATermAppl>) - Method in class org.mindswap.pellet.tbox.impl.UnaryTBox
 
add(ATermAppl) - Static method in class org.mindswap.pellet.utils.AnnotationClasses
Adds the specified class to the set of annotation classes.
add(T, Bool) - Method in class org.mindswap.pellet.utils.CandidateSet
 
add(T) - Method in class org.mindswap.pellet.utils.DisjointSet
 
add(int) - Method in class org.mindswap.pellet.utils.intset.ArrayIntSet
Adds a new integer to this set.
add(int) - Method in class org.mindswap.pellet.utils.intset.BitIntSet
 
add(int) - Method in class org.mindswap.pellet.utils.intset.HashIntSet
 
add(int) - Method in interface org.mindswap.pellet.utils.intset.IntSet
Adds a new integer to this set.
add(int) - Method in class org.mindswap.pellet.utils.intset.ShiftedBitIntSet
 
add(int) - Method in class org.mindswap.pellet.utils.intset.TreeIntSet
 
add(K, V) - Method in class org.mindswap.pellet.utils.MultiValueMap
 
add(Number, int) - Static method in class org.mindswap.pellet.utils.NumberUtils
 
add(T) - Method in class org.mindswap.pellet.utils.PartialOrderBuilder
 
add(T, boolean) - Method in class org.mindswap.pellet.utils.PartialOrderBuilder
Add a new element to the partial order of this builder with its comparator.
add(T, Set<T>) - Static method in class org.mindswap.pellet.utils.SetUtils
Adds the given object to the set but saves memory space by allocating only the required amount for small sets.
add(ROW, COL, Number) - Method in class org.mindswap.pellet.utils.StatisticsTable
 
add(COL, Map<ROW, ? extends Number>) - Method in class org.mindswap.pellet.utils.StatisticsTable
 
add(Timer) - Method in class org.mindswap.pellet.utils.Timer
Update the total time elapsed and number of counts by by adding the values from another timer.
add(PelletCmdOption) - Method in class pellet.PelletCmdOptions
 
addAll(Map<K, Set<V>>, K, Collection<V>) - Static method in class com.clarkparsia.pellet.utils.MultiMapUtils
 
addAll(IntSet) - Method in class org.mindswap.pellet.utils.intset.AbstractIntSet
 
addAll(IntSet) - Method in class org.mindswap.pellet.utils.intset.ArrayIntSet
Adds all the integers from another set to this set.
addAll(IntSet) - Method in class org.mindswap.pellet.utils.intset.BitIntSet
 
addAll(IntSet) - Method in class org.mindswap.pellet.utils.intset.HashIntSet
 
addAll(IntSet) - Method in interface org.mindswap.pellet.utils.intset.IntSet
Adds all the integers from another set to this set.
addAll(IntSet) - Method in class org.mindswap.pellet.utils.intset.TreeIntSet
 
addAll(K, Collection<? extends V>) - Method in class org.mindswap.pellet.utils.MultiValueMap
 
addAll(Collection<? extends T>) - Method in class org.mindswap.pellet.utils.PartialOrderBuilder
Adds a collection of elements to the partial order.
addAll(Timers) - Method in class org.mindswap.pellet.utils.Timers
 
addAllDifferent(ATermList) - Method in class org.mindswap.pellet.ABox
 
addAllDifferent(ATermList) - Method in class org.mindswap.pellet.KnowledgeBase
 
addAllowedIRI(IRI) - Method in class com.clarkparsia.pellet.owlapiv3.LimitedMapIRIMapper
 
addAllowedIRI(IRI, IRI) - Method in class com.clarkparsia.pellet.owlapiv3.LimitedMapIRIMapper
 
addAllowedURI(URI) - Method in class org.mindswap.pellet.owlapi.LimitedMapURIMapper
 
addAllowedURI(URI, URI) - Method in class org.mindswap.pellet.owlapi.LimitedMapURIMapper
 
addAllParticipatingAxioms(Collection<? extends OWLClassAxiom>) - Method in class com.clarkparsia.pellint.model.Lint
 
addAllParticipatingClasses(Collection<? extends OWLClass>) - Method in class com.clarkparsia.pellint.model.Lint
 
addAllStatements(Iterator<Statement>) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addAllStatements(List<Statement>) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addAllStatementsWithExistingBNodesOnly(List<Statement>) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addAllTypes(Map<ATermAppl, DependencySet>, DependencySet) - Method in class org.mindswap.pellet.Literal
 
addAnnotation(ATermAppl, ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addAnnotationProperty(ATerm) - Method in class org.mindswap.pellet.KnowledgeBase
 
addAnnotationRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addAnnotationRole(ATermAppl) - Method in class org.mindswap.pellet.RBox
 
addAnonInverse(ATermAppl) - Method in class com.clarkparsia.pellet.expressivity.Expressivity
 
addAntisymmetricProperty(ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
Deprecated. Use KnowledgeBase.addAsymmetricProperty(ATermAppl)
addAntiSymmetricRole(Resource) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addAsymmetricProperty(ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addAxiom(OWLAxiom) - Method in class com.clarkparsia.modularity.AbstractModuleExtractor
 
addAxiom(OWLAxiom) - Method in interface com.clarkparsia.modularity.ModuleExtractor
Adds an axiom to the extractor.
addAxiom(OWLAxiom, Set<OWLOntology>, OWLOntologyManager) - Static method in class com.clarkparsia.owlapi.OntologyUtils
Add the axiom to all the given ontologies.
addAxiom(OWLAxiom, Set<OWLOntology>, OWLOntologyManager) - Static method in class com.clarkparsia.owlapiv3.OntologyUtils
Add the axiom to all the given ontologies.
addAxiom(ATermAppl) - Method in class org.mindswap.pellet.tbox.impl.TBoxExpImpl
 
addAxiom(ATermAppl) - Method in class org.mindswap.pellet.tbox.impl.TBoxImpl
 
addAxiom(ATermAppl) - Method in interface org.mindswap.pellet.tbox.TBox
Add a TBox axiom.
addAxioms(OWLOntology, Collection<? extends OWLAxiom>) - Static method in class com.clarkparsia.owlapi.OntologyUtils
 
addAxioms(OWLOntology, OWLAxiom...) - Static method in class com.clarkparsia.owlapi.OntologyUtils
 
addAxioms(OWLOntology, Collection<? extends OWLAxiom>) - Static method in class com.clarkparsia.owlapiv3.OntologyUtils
 
addAxioms(OWLOntology, OWLAxiom...) - Static method in class com.clarkparsia.owlapiv3.OntologyUtils
 
addBoolean(boolean) - Method in class org.mindswap.pellet.dig.DIGResponse
 
addBranch(Branch) - Method in class org.mindswap.pellet.tableau.completion.CompletionStrategy
 
addBranch(Branch) - Method in class org.mindswap.pellet.tableau.completion.EmptySRIQStrategy
 
addBranchAddDependency(Branch) - Method in class org.mindswap.pellet.tableau.completion.incremental.DependencyIndex
Add a new branch dependency
addClass(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addClass(ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addClass(ATermAppl) - Method in class org.mindswap.pellet.tbox.impl.TBoxExpImpl
 
addClass(ATermAppl) - Method in class org.mindswap.pellet.tbox.impl.TBoxImpl
 
addClass(ATermAppl) - Method in interface org.mindswap.pellet.tbox.TBox
Add a named class declaration
addCloseBranchDependency(Branch, DependencySet) - Method in class org.mindswap.pellet.tableau.completion.incremental.DependencyIndex
Add a new branch ds removal dependency
addComment(String) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addComplementClass(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addConceptSet(Collection<Set<ATermAppl>>) - Method in class org.mindswap.pellet.dig.DIGResponse
 
addDataPropertyValue(ATermAppl, ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
Deprecated. Use addPropertyValue instead
addDatatype(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addDatatype(ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addDatatypeDefinition(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
Adds a new datatype defined to be equivalent to the given data range expression.
addDatatypeProperty(ATerm) - Method in class org.mindswap.pellet.KnowledgeBase
Add a new object property.
addDatatypeRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addDatatypeRole(ATermAppl) - Method in class org.mindswap.pellet.RBox
 
addDef(ATermAppl) - Method in class org.mindswap.pellet.tbox.impl.TBoxBase
 
addDef(ATermAppl) - Method in class org.mindswap.pellet.tbox.impl.TermDefinition
 
addDef(ATermAppl) - Method in class org.mindswap.pellet.tbox.impl.TuBox
 
addDefinite(E) - Method in class com.clarkparsia.pellint.rdfxml.DoubtfulSet
 
addDeletedEdge(Edge) - Method in class com.clarkparsia.pellet.impl.SimpleIncrementalChangeTracker
 
addDeletedEdge(Edge) - Method in interface com.clarkparsia.pellet.IncrementalChangeTracker
Record that a new edge has been deleted from the ABox
addDeletedType(Node, ATermAppl) - Method in class com.clarkparsia.pellet.impl.SimpleIncrementalChangeTracker
 
addDeletedType(Node, ATermAppl) - Method in interface com.clarkparsia.pellet.IncrementalChangeTracker
Record that a type was deleted from an individual
addDescription(Model, Resource) - Method in class org.mindswap.pellet.jena.PelletReasoner
 
addDifferent(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.ABox
 
addDifferent(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addDifferents(Individual) - Method in class com.clarkparsia.pellet.rules.rete.Compiler
Add different assertions as facts to rete.
addDisjointClass(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addDisjointClasses(ATermList) - Method in class org.mindswap.pellet.KnowledgeBase
 
addDisjointClasses(List<ATermAppl>) - Method in class org.mindswap.pellet.KnowledgeBase
 
addDisjointProperties(ATermList) - Method in class org.mindswap.pellet.KnowledgeBase
 
addDisjointProperties(List<ATermAppl>) - Method in class org.mindswap.pellet.KnowledgeBase
 
addDisjointProperty(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addDisjointProperty(ATermAppl, ATermAppl, DependencySet) - Method in class org.mindswap.pellet.KnowledgeBase
 
addDisjointRole(ATerm, ATerm, DependencySet) - Method in class org.mindswap.pellet.RBox
 
addDisjointRole(Role, DependencySet) - Method in class org.mindswap.pellet.Role
 
addDistVar(ATermAppl, Query.VarType) - Method in interface com.clarkparsia.pellet.sparqldl.model.Query
Adds a distinguished variable to the query with its type - there can be more variable types to support punning.
addDistVar(ATermAppl, Query.VarType) - Method in class com.clarkparsia.pellet.sparqldl.model.QueryImpl
Adds a distinguished variable to the query with its type - there can be more variable types to support punning.
addDomain(ATerm, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addDomain(ATerm, ATermAppl, Set<ATermAppl>) - Method in class org.mindswap.pellet.KnowledgeBase
For internal use when domain axioms come from TBox absorption
addDomain(ATerm, ATermAppl, Set<ATermAppl>) - Method in class org.mindswap.pellet.RBox
Add a non-asserted property domain axiom
addDomain(ATerm, ATermAppl) - Method in class org.mindswap.pellet.RBox
Add an asserted property domain axiom
addDomain(ATermAppl, DependencySet) - Method in class org.mindswap.pellet.Role
 
addEdge(Individual, Role, Node, DependencySet) - Method in class com.clarkparsia.pellet.rules.ContinuousRulesStrategy
 
addEdge(V, V) - Method in class com.clarkparsia.pellint.util.OptimizedDirectedMultigraph
 
addEdge(V, V, int) - Method in class com.clarkparsia.pellint.util.OptimizedDirectedMultigraph
 
addEdge(ATermAppl, ATermAppl, ATermAppl, DependencySet) - Method in class org.mindswap.pellet.ABox
 
addEdge(Edge) - Method in class org.mindswap.pellet.EdgeList
 
addEdge(Role, Node, DependencySet) - Method in class org.mindswap.pellet.Individual
 
addEdge(Individual, Role, Node, DependencySet) - Method in class org.mindswap.pellet.tableau.completion.CompletionStrategy
 
addEdgeDependency(Edge, DependencySet) - Method in class org.mindswap.pellet.tableau.completion.incremental.DependencyIndex
Add a new edge dependency
addEdgeList(EdgeList) - Method in class org.mindswap.pellet.EdgeList
 
addEquivalent(T) - Method in class org.mindswap.pellet.taxonomy.TaxonomyNode
 
addEquivalentClass(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addEquivalentNode(T, TaxonomyNode<T>) - Method in class org.mindswap.pellet.taxonomy.Taxonomy
 
addEquivalentProperty(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addEquivalentRole(ATerm, ATerm) - Method in class org.mindswap.pellet.RBox
 
addEquivalentRole(ATerm, ATerm, DependencySet) - Method in class org.mindswap.pellet.RBox
 
addEquivalents(T, Collection<T>) - Method in class org.mindswap.pellet.taxonomy.Taxonomy
Add a collection of elements equivalent to an element already in the taxonomy.
addError(int, String) - Method in class org.mindswap.pellet.dig.DIGResponse
 
addFact(Edge) - Method in class com.clarkparsia.pellet.rules.rete.Compiler
Add property assertion as a fact to rete (if relevant).
addFact(Individual, ATermAppl, DependencySet) - Method in class com.clarkparsia.pellet.rules.rete.Compiler
Add concept assertion as a fact to rete (if relevant).
addFact(Fact) - Method in class com.clarkparsia.pellet.rules.rete.Interpreter
 
addFinalState(State<T>) - Method in class org.mindswap.pellet.utils.fsm.TransitionGraph
 
addFreshIndividual(Individual, DependencySet) - Method in class org.mindswap.pellet.ABox
 
addFunctionalProperty(ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addFunctionalSuper(Role) - Method in class org.mindswap.pellet.Role
 
addIfUnfoldable(ATermAppl) - Method in class org.mindswap.pellet.tbox.impl.TuBox
 
addIndividual(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addIndividual(ATermAppl, DependencySet) - Method in class org.mindswap.pellet.ABox
 
addIndividual(ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addIndividualPairSet(Map<ATermAppl, Collection<ATermAppl>>) - Method in class org.mindswap.pellet.dig.DIGResponse
 
addIndividualSet(Collection<ATermAppl>) - Method in class org.mindswap.pellet.dig.DIGResponse
 
addInterval(Object, Object) - Method in class org.mindswap.pellet.utils.GenericIntervalList
Deprecated.  
addInterval(Object, boolean, Object, boolean) - Method in class org.mindswap.pellet.utils.GenericIntervalList
Deprecated.  
addIntervalList(GenericIntervalList) - Method in class org.mindswap.pellet.utils.GenericIntervalList
Deprecated.  
addInverseFunctionalProperty(ATerm) - Method in class org.mindswap.pellet.KnowledgeBase
 
addInverseFunctionalRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addInverseProperty(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addInverseRole(ATerm, ATerm, DependencySet) - Method in class org.mindswap.pellet.RBox
 
addIrreflexiveProperty(ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addIrreflexiveRole(Resource) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addKey(ATermAppl, Set<ATermAppl>) - Method in class org.mindswap.pellet.KnowledgeBase
 
addLint(LintPattern, Lint) - Method in class com.clarkparsia.pellint.model.OntologyLints
 
addLints(LintPattern, List<Lint>) - Method in class com.clarkparsia.pellint.model.OntologyLints
 
addLiteral(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addLiteral(DependencySet) - Method in class org.mindswap.pellet.ABox
Add a new literal to the ABox.
addLiteral(ATermAppl) - Method in class org.mindswap.pellet.ABox
Add a new literal to the ABox.
addLiteral(ATermAppl, DependencySet) - Method in class org.mindswap.pellet.ABox
 
addLiteralAsClass(Literal) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addLiteralAsIndividual(Literal) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addMergeDependency(ATermAppl, ATermAppl, DependencySet) - Method in class org.mindswap.pellet.tableau.completion.incremental.DependencyIndex
Add a new merge dependency
addMissingStatements(List<Statement>) - Method in class com.clarkparsia.pellint.rdfxml.RDFLints
 
addNamespace(String, String) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addNegatedPropertyValue(ATermAppl, ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addNewEdge(Edge) - Method in class com.clarkparsia.pellet.impl.SimpleIncrementalChangeTracker
 
addNewEdge(Edge) - Method in interface com.clarkparsia.pellet.IncrementalChangeTracker
Record that a new edge has been added to the ABox
addNewIndividual(Individual) - Method in class com.clarkparsia.pellet.impl.SimpleIncrementalChangeTracker
 
addNewIndividual(Individual) - Method in interface com.clarkparsia.pellet.IncrementalChangeTracker
Record that a new individual has been added to the ABox
addNode(AlphaNode) - Method in class com.clarkparsia.pellet.rules.rete.AlphaStore
 
addNode(Collection<T>, Collection<T>, Collection<T>, boolean) - Method in class org.mindswap.pellet.taxonomy.Taxonomy
Add a node with known supers and subs.
addNode(T, boolean) - Method in class org.mindswap.pellet.taxonomy.Taxonomy
 
addNominal(ATermAppl) - Method in class com.clarkparsia.pellet.expressivity.Expressivity
 
addObjectProperty(ATerm) - Method in class org.mindswap.pellet.KnowledgeBase
Add a new object property.
addObjectPropertyValue(ATermAppl, ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
Deprecated. Use addPropertyValue instead
addObjectRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addObjectRole(ATermAppl) - Method in class org.mindswap.pellet.RBox
 
addOntologies(Set<OWLOntology>) - Method in class com.clarkparsia.modularity.AbstractModuleExtractor
 
addOntologies(Set<OWLOntology>) - Method in interface com.clarkparsia.modularity.ModuleExtractor
Adds all the axioms from a set of ontologies to the extractor.
addOntology(OWLOntology) - Method in class com.clarkparsia.modularity.AbstractModuleExtractor
 
addOntology(OWLOntology) - Method in interface com.clarkparsia.modularity.ModuleExtractor
Adds all the axioms of an ontology to the extractor.
addOntology(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addOntologyProperty(ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
Deprecated. 
addOntologyRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addOntologyRole(ATermAppl) - Method in class org.mindswap.pellet.RBox
Deprecated. 
addParticipatingAxiom(OWLClassAxiom) - Method in class com.clarkparsia.pellint.model.Lint
 
addParticipatingClass(OWLClass) - Method in class com.clarkparsia.pellint.model.Lint
 
addPermittedDatatype(ATermAppl) - Static method in class com.clarkparsia.pellet.datatypes.types.text.RestrictedTextDatatype
 
addProperty(ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addPropertyValue(ATermAppl, ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addRange(ATerm, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addRange(ATerm, ATermAppl, Set<ATermAppl>) - Method in class org.mindswap.pellet.KnowledgeBase
For internal use when range axioms come from TBox absorption
addRange(ATerm, ATermAppl, Set<ATermAppl>) - Method in class org.mindswap.pellet.RBox
Add a non-asserted property range axiom
addRange(ATerm, ATermAppl) - Method in class org.mindswap.pellet.RBox
Add an asserted property range axiom
addRange(ATermAppl, DependencySet) - Method in class org.mindswap.pellet.Role
 
addRDFSClass(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addReflexiveProperty(ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addReflexiveRole(Resource) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addResourcesAsLiteral(Resource) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addRestriction(Resource) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addResultVar(ATermAppl) - Method in interface com.clarkparsia.pellet.sparqldl.model.Query
Adds a distinguished variable that appears in the result projection to the query;
addResultVar(ATermAppl) - Method in class com.clarkparsia.pellet.sparqldl.model.QueryImpl
Adds a distinguished variable that appears in the result projection to the query;
addRole(ATermAppl) - Method in class org.mindswap.pellet.RBox
 
addRoleSet(Collection<Set<ATermAppl>>, boolean) - Method in class org.mindswap.pellet.dig.DIGResponse
 
addRow(List) - Method in class org.mindswap.pellet.output.TableData
Deprecated. Use TableData.add(List) instead
addRule(Rule) - Method in class org.mindswap.pellet.KnowledgeBase
Add a rule to the KB.
addSame(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.ABox
 
addSame(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addStatement(Statement) - Method in class com.clarkparsia.pellint.rdfxml.RDFModel
 
addSub(TaxonomyNode<T>) - Method in class org.mindswap.pellet.taxonomy.TaxonomyNode
 
addSubClass(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addSubProperty(ATerm, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addSubRole(ATerm, ATerm) - Method in class org.mindswap.pellet.RBox
 
addSubRole(ATerm, ATerm, DependencySet) - Method in class org.mindswap.pellet.RBox
 
addSubRole(Role) - Method in class org.mindswap.pellet.Role
r is subrole of this role
addSubRole(Role, DependencySet) - Method in class org.mindswap.pellet.Role
Add sub role with depedency set.
addSubRoleChain(ATermList) - Method in class org.mindswap.pellet.Role
Add a sub role chain without dependency tracking information
addSubRoleChain(ATermList, DependencySet) - Method in class org.mindswap.pellet.Role
Add a sub role chain with dependency tracking.
addSubs(Collection<TaxonomyNode<T>>) - Method in class org.mindswap.pellet.taxonomy.TaxonomyNode
 
addSuper(Collection<T>, T) - Method in class org.mindswap.pellet.taxonomy.Taxonomy
Add a collection of elements as subs to an element
addSuper(T, T) - Method in class org.mindswap.pellet.taxonomy.Taxonomy
Add a sub/super relation
addSuperExplanation(Taxonomy<ATermAppl>, ATermAppl, ATermAppl, Set<ATermAppl>) - Static method in class org.mindswap.pellet.utils.TaxonomyUtils
 
addSuperRole(Role) - Method in class org.mindswap.pellet.Role
r is superrole of this role
addSuperRole(Role, DependencySet) - Method in class org.mindswap.pellet.Role
 
addSupers(T, Collection<T>) - Method in class org.mindswap.pellet.taxonomy.Taxonomy
Add a collection of supers to an element
addSupers(Collection<TaxonomyNode<T>>) - Method in class org.mindswap.pellet.taxonomy.TaxonomyNode
 
addSWRLVariable(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addSymmetricProperty(ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addSymmetricRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addSynonms(Element, Collection<ATermAppl>, String) - Method in class org.mindswap.pellet.dig.DIGResponse
 
addTransition(T, State<T>) - Method in class org.mindswap.pellet.utils.fsm.State
Create a transition from this state to the given state on given symbol
addTransition(State<T>) - Method in class org.mindswap.pellet.utils.fsm.State
Create an epsilon transition from this state to the given state
addTransition(State<T>, T, State<T>) - Method in class org.mindswap.pellet.utils.fsm.TransitionGraph
 
addTransition(State<T>, State<T>) - Method in class org.mindswap.pellet.utils.fsm.TransitionGraph
 
addTransitiveProperty(ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addTransitiveRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addTransitiveSubRole(Role) - Method in class org.mindswap.pellet.Role
 
addType(Node, ATermAppl, DependencySet) - Method in class com.clarkparsia.pellet.rules.ContinuousRulesStrategy
 
addType(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.ABox
 
addType(ATermAppl, ATermAppl, DependencySet) - Method in class org.mindswap.pellet.ABox
 
addType(ATermAppl, DependencySet) - Method in class org.mindswap.pellet.Individual
 
addType(ATermAppl, ATermAppl) - Method in class org.mindswap.pellet.KnowledgeBase
 
addType(ATermAppl, ATermAppl, DependencySet) - Method in class org.mindswap.pellet.KnowledgeBase
 
addType(ATermAppl, DependencySet) - Method in class org.mindswap.pellet.Literal
 
addType(ATermAppl, DependencySet) - Method in class org.mindswap.pellet.Node
 
addType(Node, ATermAppl, DependencySet) - Method in class org.mindswap.pellet.tableau.completion.CompletionStrategy
 
addTypeDependency(ATermAppl, ATermAppl, DependencySet) - Method in class org.mindswap.pellet.tableau.completion.incremental.DependencyIndex
Add a new type dependency
addUnprunedNode(Node) - Method in class com.clarkparsia.pellet.impl.SimpleIncrementalChangeTracker
 
addUnprunedNode(Node) - Method in interface com.clarkparsia.pellet.IncrementalChangeTracker
Record that a node has been "unpruned" because a merge was reverted during restore
addUntypedRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
addUpdatedIndividual(Individual) - Method in class com.clarkparsia.pellet.impl.SimpleIncrementalChangeTracker
 
addUpdatedIndividual(Individual) - Method in interface com.clarkparsia.pellet.IncrementalChangeTracker
Record that an individual has been updated
addValues(Collection<ATermAppl>, String) - Method in class org.mindswap.pellet.dig.DIGResponse
 
all(OWLDataPropertyExpression, OWLDataRange) - Static method in class com.clarkparsia.owlapi.OWL
 
all(OWLObjectPropertyExpression, OWLDescription) - Static method in class com.clarkparsia.owlapi.OWL
 
all(OWLDataPropertyExpression, OWLDataRange) - Static method in class com.clarkparsia.owlapiv3.OWL
 
all(OWLObjectPropertyExpression, OWLClassExpression) - Static method in class com.clarkparsia.owlapiv3.OWL
 
all(ATermAppl, ATermAppl) - Static method in class com.clarkparsia.pellet.utils.TermFactory
Create an all values restriction.
ALL - Static variable in class org.mindswap.pellet.dig.DIGConstants
 
ALL - Static variable in class org.mindswap.pellet.Node
 
ALL_CLASS_STATEMENTS - Static variable in enum org.mindswap.pellet.jena.ModelExtractor.StatementType
All statements about classes
ALL_CONCEPT_NAMES - Static variable in class org.mindswap.pellet.dig.DIGConstants
 
ALL_INDIVIDUAL_STATEMENTS - Static variable in enum org.mindswap.pellet.jena.ModelExtractor.StatementType
All statements about individuals
ALL_INDIVIDUALS - Static variable in class org.mindswap.pellet.dig.DIGConstants
 
ALL_PROPERTY_STATEMENTS - Static variable in enum org.mindswap.pellet.jena.ModelExtractor.StatementType
All statements about properties
ALL_ROLE_NAMES - Static variable in class org.mindswap.pellet.dig.DIGConstants
 
ALL_STATEMENTS - Static variable in enum org.mindswap.pellet.jena.ModelExtractor.StatementType
All statements (without Jena predicates for direct relations)
ALL_STATEMENTS_INCLUDING_JENA - Static variable in enum org.mindswap.pellet.jena.ModelExtractor.StatementType
All statements (including Jena predicates for direct relations)
allConceptNames() - Method in class org.mindswap.pellet.dig.DIGAskHandler
 
ALLDIFFERENTFUN - Static variable in class org.mindswap.pellet.utils.ATermUtils
 
AllDisjointClasses - Static variable in class org.mindswap.pellet.jena.vocabulary.OWL2
 
AllDisjointProperties - Static variable in class org.mindswap.pellet.jena.vocabulary.OWL2
 
ALLFUN - Static variable in class org.mindswap.pellet.utils.ATermUtils
 
allIndividuals() - Method in class org.mindswap.pellet.dig.DIGAskHandler
 
allIntegers() - Static method in class com.clarkparsia.pellet.datatypes.OWLRealInterval
 
allIntegers() - Static method in class com.clarkparsia.pellet.datatypes.types.real.IntegerInterval
 
AllNamedIndividualsIterator - Class in com.clarkparsia.pellet.rules
Title: All Named Individuals Iterator
AllNamedIndividualsIterator(ABox) - Constructor for class com.clarkparsia.pellet.rules.AllNamedIndividualsIterator
 
allReals() - Static method in class com.clarkparsia.pellet.datatypes.OWLRealInterval
 
allReals() - Static method in class com.clarkparsia.pellet.datatypes.types.real.ContinuousRealInterval
 
allRoleNames() - Method in class org.mindswap.pellet.dig.DIGAskHandler
 
allValuesFrom(OWLObjectPropertyExpression, OWLDescription) - Static method in class com.clarkparsia.owlapi.OWL
Deprecated. Use OWL.all(OWLObjectPropertyExpression, OWLDescription) instead
allValuesFrom(OWLObjectPropertyExpression, OWLClassExpression) - Static method in class com.clarkparsia.owlapiv3.OWL
Deprecated. Use OWL.all(OWLObjectPropertyExpression, OWLClassExpression) instead
AllValuesRule - Class in org.mindswap.pellet.tableau.completion.rule
Title:
AllValuesRule(CompletionStrategy) - Constructor for class org.mindswap.pellet.tableau.completion.rule.AllValuesRule
 
AlphaIndex - Class in com.clarkparsia.pellet.rules.rete
Title: Alpha Index
AlphaIndex() - Constructor for class com.clarkparsia.pellet.rules.rete.AlphaIndex
 
AlphaNode - Class in com.clarkparsia.pellet.rules.rete
Title: Alpha Node
AlphaNode(TermTuple) - Constructor for class com.clarkparsia.pellet.rules.rete.AlphaNode
 
AlphaNumericComparator - Class in org.mindswap.pellet.utils
This is a comparator to perform a mix of alphabetical+numeric comparison.
AlphaNumericComparator() - Constructor for class org.mindswap.pellet.utils.AlphaNumericComparator
Create a case sensitive AlphaNumericComparator
AlphaNumericComparator(boolean) - Constructor for class org.mindswap.pellet.utils.AlphaNumericComparator
Create an AlphaNumericComparator
AlphaStore - Class in com.clarkparsia.pellet.rules.rete
Title: Alpha Store
AlphaStore() - Constructor for class com.clarkparsia.pellet.rules.rete.AlphaStore
 
ALWAYS_REBUILD_RETE - Static variable in class org.mindswap.pellet.PelletOptions
Always rebuild rete (no incremental update)
ancestors(Element) - Method in class org.mindswap.pellet.dig.DIGAskHandler
 
ANCESTORS - Static variable in class org.mindswap.pellet.dig.DIGConstants
 
and(OWLDescription...) - Static method in class com.clarkparsia.owlapi.OWL
 
and(Set<? extends OWLDescription>) - Static method in class com.clarkparsia.owlapi.OWL
 
and(OWLClassExpression...) - Static method in class com.clarkparsia.owlapiv3.OWL
 
and(Set<? extends OWLClassExpression>) - Static method in class com.clarkparsia.owlapiv3.OWL
 
and(Filter...) - Static method in class com.clarkparsia.pellet.sparqldl.model.MultiFilterWrapper
 
and(ATermAppl, ATermAppl) - Static method in class com.clarkparsia.pellet.utils.TermFactory
 
and(ATermAppl...) - Static method in class com.clarkparsia.pellet.utils.TermFactory
 
AND - Static variable in class org.mindswap.pellet.dig.DIGConstants
 
and(Bool) - Method in class org.mindswap.pellet.utils.Bool
 
ANDFUN - Static variable in class org.mindswap.pellet.utils.ATermUtils
 
annotatedProperty - Static variable in class org.mindswap.pellet.jena.vocabulary.OWL2
 
annotatedSource - Static variable in class org.mindswap.pellet.jena.vocabulary.OWL2
 
annotatedTarget - Static variable in class org.mindswap.pellet.jena.vocabulary.OWL2
 
annotation(OWLEntity, OWLAnnotation<? extends OWLObject>) - Static method in class com.clarkparsia.owlapi.OWL
 
annotation(OWLEntity, URI, OWLConstant) - Static method in class com.clarkparsia.owlapi.OWL
 
annotation(OWLEntity, URI, OWLIndividual) - Static method in class com.clarkparsia.owlapi.OWL
 
annotation(OWLEntity, OWLAnnotation) - Static method in class com.clarkparsia.owlapiv3.OWL
 
annotation(OWLEntity, IRI, OWLLiteral) - Static method in class com.clarkparsia.owlapiv3.OWL
 
annotation(OWLEntity, IRI, OWLIndividual) - Static method in class com.clarkparsia.owlapiv3.OWL
 
Annotation - Static variable in class org.mindswap.pellet.jena.vocabulary.OWL2
 
ANNOTATION - Static variable in class org.mindswap.pellet.Role
Deprecated. 
AnnotationAtom(ATermAppl, ATermAppl, ATermAppl) - Static method in class com.clarkparsia.pellet.sparqldl.model.QueryAtomFactory
 
AnnotationClasses - Class in org.mindswap.pellet.utils
In some ontologies, such as the ones from OBO, annotations may be nested and contain type assertions on annotation values.
AnnotationClasses() - Constructor for class org.mindswap.pellet.utils.AnnotationClasses
 
ANON_FUN - Static variable in class org.mindswap.pellet.utils.ATermUtils
 
ANON_NOMINAL_FUN - Static variable in class org.mindswap.pellet.utils.ATermUtils
 
AnonymousIndividual(String) - Static method in class com.clarkparsia.owlapi.OWL
 
AnonymousIndividual() - Static method in class com.clarkparsia.owlapiv3.OWL
 
AnonymousIndividual(String) - Static method in class com.clarkparsia.owlapiv3.OWL
 
antecedent(SWRLAtom<?>...) - Static method in class com.clarkparsia.owlapi.SWRL
 
antecedent(SWRLAtom...) - Static method in class com.clarkparsia.owlapiv3.SWRL
 
ANTI_SYM - Static variable in class org.mindswap.pellet.Role
Use Role.ASYM
antiSymmetric(OWLObjectPropertyExpression) - Static method in class com.clarkparsia.owlapi.OWL
Deprecated. Use OWL.asymmetric(OWLObjectPropertyExpression) instead
ANTISYMMETRICFUN - Static variable in class org.mindswap.pellet.utils.ATermUtils
Deprecated. Use ATermUtils.ASYMMETRICFUN
AntisymmetricProperty - Static variable in class org.mindswap.pellet.jena.vocabulary.OWL2
Deprecated.  
ANY_SIMPLE_TYPE - Static variable in class com.clarkparsia.owlapi.XSD
 
ANY_SIMPLE_TYPE - Static variable in class com.clarkparsia.owlapiv3.XSD
 
ANY_SIMPLE_TYPE - Static variable in class com.clarkparsia.pellet.datatypes.Datatypes
 
ANY_TYPE - Static variable in class com.clarkparsia.owlapi.XSD
 
ANY_TYPE - Static variable in class com.clarkparsia.owlapiv3.XSD
 
ANY_TYPE - Static variable in class com.clarkparsia.pellet.datatypes.Datatypes
 
ANY_URI - Static variable in class com.clarkparsia.owlapi.XSD
 
ANY_URI - Static variable in class com.clarkparsia.owlapiv3.XSD
 
ANY_URI - Static variable in class com.clarkparsia.pellet.datatypes.Datatypes
 
anyURI - Static variable in class com.clarkparsia.pellet.rules.builtins.URIOperators
 
append(Iterator<? extends T>) - Method in class org.mindswap.pellet.utils.iterator.MultiIterator
 
append(ATermList) - Method in class org.mindswap.pellet.utils.iterator.MultiListIterator
 
apply(ABox, Literal, Literal...) - Method in interface com.clarkparsia.pellet.rules.builtins.Function
Apply the function against a set of arguments.
apply(ABox, Literal[]) - Method in interface com.clarkparsia.pellet.rules.builtins.GeneralFunction
Apply the function against a set of arguments.
apply(ABox, Literal, Literal...) - Method in class com.clarkparsia.pellet.rules.builtins.NumericAdapter
 
apply(BigDecimal...) - Method in interface com.clarkparsia.pellet.rules.builtins.NumericFunction
 
apply(BigInteger...) - Method in interface com.clarkparsia.pellet.rules.builtins.NumericFunction
 
apply(Double...) - Method in interface com.clarkparsia.pellet.rules.builtins.NumericFunction
 
apply(Float...) - Method in interface com.clarkparsia.pellet.rules.builtins.NumericFunction
 
apply(ABox, Literal, Literal...) - Method in class com.clarkparsia.pellet.rules.builtins.StringFunctionAdapter
 
apply(String...) - Method in interface com.clarkparsia.pellet.rules.builtins.StringToStringFunction
 
apply(ResultBinding) - Method in class com.clarkparsia.pellet.sparqldl.model.CoreImpl
 
apply(ResultBinding) - Method in class com.clarkparsia.pellet.sparqldl.model.CoreNewImpl
Applies variable binding to the current atom and returns the result which might be same as the current atom.
apply(ResultBinding) - Method in class com.clarkparsia.pellet.sparqldl.model.NotKnownQueryAtom
 
apply(ResultBinding) - Method in interface com.clarkparsia.pellet.sparqldl.model.Query
Replace the variables in the query with the values specified in the binding and return a new query instance (without modifying this query).
apply(ResultBinding) - Method in interface com.clarkparsia.pellet.sparqldl.model.QueryAtom
Applies variable binding to the current atom and returns the result which might be same as the current atom.
apply(ResultBinding) - Method in class com.clarkparsia.pellet.sparqldl.model.QueryAtomImpl
Applies variable binding to the current atom and returns the result which might be same as the current atom.
apply(ResultBinding) - Method in class com.clarkparsia.pellet.sparqldl.model.QueryImpl
Replace the variables in the query with the values specified in the binding and return a new query instance (without modifying this query).
apply(ResultBinding) - Method in class com.clarkparsia.pellet.sparqldl.model.UnionQueryAtom
 
apply(OWLOntologyManager, OWLOntology) - Method in class com.clarkparsia.pellint.model.LintFixer
Replace the detected OWLAxioms with a new set of OWLAxioms, and apply the change to the given OWLOntology using the given OWLOntologyManager.
apply(IndividualIterator) - Method in class org.mindswap.pellet.tableau.completion.rule.AbstractTableauRule
 
apply(Individual) - Method in class org.mindswap.pellet.tableau.completion.rule.AllValuesRule
 
apply(Individual) - Method in class org.mindswap.pellet.tableau.completion.rule.ChooseRule
 
apply(Individual) - Method in class org.mindswap.pellet.tableau.completion.rule.DataCardinalityRule
 
apply(Individual) - Method in class org.mindswap.pellet.tableau.completion.rule.DataSatisfiabilityRule
 
apply(Individual) - Method in class org.mindswap.pellet.tableau.completion.rule.DisjunctionRule
 
apply(Individual) - Method in class org.mindswap.pellet.tableau.completion.rule.GuessRule
 
apply(Individual) - Method in class org.mindswap.pellet.tableau.completion.rule.MaxRule
Apply max rule to the individual.
apply(Individual) - Method in class org.mindswap.pellet.tableau.completion.rule.MinRule
 
apply(Individual) - Method in class org.mindswap.pellet.tableau.completion.rule.NominalRule
 
apply(Individual) - Method in class org.mindswap.pellet.tableau.completion.rule.SelfRule
 
apply(Individual) - Method in class org.mindswap.pellet.tableau.completion.rule.SomeValuesRule
 
apply(IndividualIterator) - Method in interface org.mindswap.pellet.tableau.completion.rule.TableauRule
 
apply(Individual) - Method in interface org.mindswap.pellet.tableau.completion.rule.TableauRule
 
apply(Individual) - Method in class org.mindswap.pellet.tableau.completion.rule.UnfoldingRule
 
applyAllValues(Individual, ATermAppl, DependencySet) - Method in class org.mindswap.pellet.tableau.completion.rule.AllValuesRule
Apply the allValues rule for the given type with the given dependency.
applyAllValues(Individual, Role, Node, DependencySet) - Method in class org.mindswap.pellet.tableau.completion.rule.AllValuesRule
 
applyAllValues(Individual, ATermAppl, DependencySet) - Method in class org.mindswap.pellet.tableau.completion.rule.SimpleAllValuesRule
 
applyAllValues(Individual, Role, Node, DependencySet) - Method in class org.mindswap.pellet.tableau.completion.rule.SimpleAllValuesRule
 
applyChanges(List<? extends OWLOntologyChange>) - Method in class com.clarkparsia.pellet.owlapiv3.PelletLoader
Apply the given changes to the Pellet KB.
applyChanges(List<? extends OWLOntologyChange>) - Method in class org.mindswap.pellet.owlapi.PelletLoader
Apply the given changes to the Pellet KB.
applyConstrainingFacet(ATermAppl, Object) - Method in class com.clarkparsia.pellet.datatypes.EmptyRestrictedDatatype
 
applyConstrainingFacet(ATermAppl, Object) - Method in interface com.clarkparsia.pellet.datatypes.RestrictedDatatype
Apply a constraining facet to further restrict the value space
applyConstrainingFacet(ATermAppl, Object) - Method in class com.clarkparsia.pellet.datatypes.RestrictedFloatingPointDatatype
 
applyConstrainingFacet(ATermAppl, Object) - Method in class com.clarkparsia.pellet.datatypes.RestrictedRealDatatype
 
applyConstrainingFacet(ATermAppl, Object) - Method in class com.clarkparsia.pellet.datatypes.types.bool.RestrictedBooleanDatatype
 
applyConstrainingFacet(ATermAppl, Object) - Method in class com.clarkparsia.pellet.datatypes.types.datetime.RestrictedTimelineDatatype
 
applyConstrainingFacet(ATermAppl, Object) - Method in class com.clarkparsia.pellet.datatypes.types.duration.RestrictedDurationDatatype
 
applyConstrainingFacet(ATermAppl, Object) - Method in class com.clarkparsia.pellet.datatypes.types.floating.RestrictedFloatingPointDatatype
 
applyConstrainingFacet(ATermAppl, Object) - Method in class com.clarkparsia.pellet.datatypes.types.real.RestrictedRealDatatype
 
applyConstrainingFacet(ATermAppl, Object) - Method in class com.clarkparsia.pellet.datatypes.types.text.RestrictedTextDatatype
 
applyConstrainingFacet(ATermAppl, Object) - Method in class com.clarkparsia.pellet.datatypes.types.uri.RestrictedURIDatatype
 
applyFix(OWLOntologyManager) - Method in class com.clarkparsia.pellint.model.Lint
Apply LintFixer to the source OWLOntology where this Lint was found, using the given OWLOntologyManager.
applyFix(OWLOntologyManager) - Method in class com.clarkparsia.pellint.model.OntologyLints
Fix all reparable lints.
applyFunctionalMaxRule(Individual, Role, ATermAppl, DependencySet) - Method in class org.mindswap.pellet.tableau.completion.rule.MaxRule
 
applyNext - Variable in class org.mindswap.pellet.Individual
 
applyRete() - Method in class com.clarkparsia.pellet.rules.ContinuousRulesStrategy
 
applyRuleBindings() - Method in class com.clarkparsia.pellet.rules.ContinuousRulesStrategy
 
applyRULERule() - Method in class com.clarkparsia.pellet.rules.RuleStrategy
 
areSame() - Method in class com.clarkparsia.modularity.OntologyDiff
Checks whether the two compared ontologies were the same (i.e., there are no differences).
argument1 - Static variable in class org.mindswap.pellet.jena.vocabulary.SWRL
 
argument2 - Static variable in class org.mindswap.pellet.jena.vocabulary.SWRL
 
arguments - Static variable in class org.mindswap.pellet.jena.vocabulary.SWRL
 
ARQParser - Class in com.clarkparsia.pellet.sparqldl.parser
Title: Parser for the SPARQL-DL based on ARQ
ARQParser() - Constructor for class com.clarkparsia.pellet.sparqldl.parser.ARQParser
 
ARQParser(boolean) - Constructor for class com.clarkparsia.pellet.sparqldl.parser.ARQParser
 
ARQParserUtilities - Class in com.clarkparsia.sparqlowl.parser.arq
Title: ARQ Parser Utilities
ARQParserUtilities() - Constructor for class com.clarkparsia.sparqlowl.parser.arq.ARQParserUtilities
 
ARQTerpParser - Class in com.clarkparsia.sparqlowl.parser.arq
Title: ARQ Terp parser
ARQTerpParser() - Constructor for class com.clarkparsia.sparqlowl.parser.arq.ARQTerpParser
 
ArrayIntSet - Class in org.mindswap.pellet.utils.intset
Title:
ArrayIntSet() - Constructor for class org.mindswap.pellet.utils.intset.ArrayIntSet
 
ArrayIntSet(ArrayIntSet) - Constructor for class org.mindswap.pellet.utils.intset.ArrayIntSet
 
asDataRange() - Method in interface com.clarkparsia.pellet.datatypes.Datatype
Get the canonical data range for a datatype
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.InfiniteNamedDatatype
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.bool.XSDBoolean
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.datetime.XSDDate
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.datetime.XSDDateTime
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.datetime.XSDDateTimeStamp
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.datetime.XSDGDay
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.datetime.XSDGMonth
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.datetime.XSDGMonthDay
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.datetime.XSDGYear
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.datetime.XSDGYearMonth
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.datetime.XSDTime
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.duration.XSDDuration
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.floating.XSDDouble
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.floating.XSDFloat
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.real.AbstractDerivedIntegerType
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.real.OWLRational
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.real.OWLReal
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.real.XSDDecimal
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.text.RDFPlainLiteral
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.text.XSDLanguage
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.text.XSDName
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.text.XSDNCName
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.text.XSDNMToken
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.text.XSDNormalizedString
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.text.XSDString
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.text.XSDToken
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.types.uri.XSDAnyURI
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.XSDDecimal
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.XSDDouble
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.XSDFloat
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.XSDInteger
 
asDataRange() - Method in class com.clarkparsia.pellet.datatypes.XSDLong
 
ASK - Static variable in class org.mindswap.pellet.dig.DIGConstants
 
asks(Element) - Method in class org.mindswap.pellet.dig.DIGAskHandler
 
ASKS - Static variable in class org.mindswap.pellet.dig.DIGConstants
 
assertAtom(RuleAtom, VariableBinding, DependencySet, boolean, ABox, CompletionStrategy) - Method in class com.clarkparsia.pellet.rules.RuleAtomAsserter
 
assertionProperty - Static variable in class org.mindswap.pellet.jena.vocabulary.OWL2
 
assertTrue(boolean) - Static method in class org.mindswap.pellet.utils.ATermUtils
 
assertValid() - Method in class org.mindswap.pellet.taxonomy.Taxonomy
 
asSet(T...) - Static method in class com.clarkparsia.pellint.util.CollectionUtil
 
assumeAnnotationRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeClass(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeDatatype(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeDatatypeRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeIndividual(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeObjectRole(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeOntology(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
assumeSWRLVariable(RDFNode) - Method in class com.clarkparsia.pellint.rdfxml.OWLEntityDatabase
 
ASYM - Static variable in class org.mindswap.pellet.Role
 
asymmetric(OWLObjectPropertyExpression) - Static method in class com.clarkparsia.owlapi.OWL
 
asymmetric(OWLObjectPropertyExpression) - Static method in class com.clarkparsia.owlapiv3.OWL
 
AsymmetricAtom(ATermAppl) - Static method in class com.clarkparsia.pellet.sparqldl.model.QueryAtomFactory
 
ASYMMETRICFUN - Static variable in class org.mindswap.pellet.utils.ATermUtils
 
AsymmetricProperty - Static variable in class org.mindswap.pellet.jena.vocabulary.OWL2
 
ATermAbstractSyntaxRenderer - Class in org.mindswap.pellet.output
A simple implementation to output the terms in OWL abstract syntax.
ATermAbstractSyntaxRenderer() - Constructor for class org.mindswap.pellet.output.ATermAbstractSyntaxRenderer
 
ATermBaseRenderer - Class in org.mindswap.pellet.output
Base implementation of renderer interface to ease the implementation for different output formats.
ATermBaseRenderer() - Constructor for class org.mindswap.pellet.output.ATermBaseRenderer
 
ATermBaseVisitor - Class in org.mindswap.pellet.output
Base implementation for ATermVisitor.
ATermBaseVisitor() - Constructor for class org.mindswap.pellet.output.ATermBaseVisitor
 
ATermManchesterSyntaxRenderer - Class in org.mindswap.pellet.output
Title: ATermManchesterSyntaxRenderer
ATermManchesterSyntaxRenderer() - Constructor for class org.mindswap.pellet.output.ATermManchesterSyntaxRenderer
 
ATermRenderer - Interface in org.mindswap.pellet.output
A special kind of visitor that is designed to render the terms to output.
ATermUtils - Class in org.mindswap.pellet.utils
This class provides the functions ATerm related functions.
ATermUtils() - Constructor for class org.mindswap.pellet.utils.ATermUtils
 
ATermVisitor - Interface in org.mindswap.pellet.output
A visitor interface specifically designed for structures in Pellet.
ATLEAST - Static variable in class org.mindswap.pellet.dig.DIGConstants
 
ATMOST - Static variable in class org.mindswap.pellet.dig.DIGConstants
 
ATOM - Static variable in class org.mindswap.pellet.Node
 
AtomConstant - Class in com.clarkparsia.pellet.rules.model
Title: Atom Constant
AtomConstant(ATermAppl) - Constructor for class com.clarkparsia.pellet.rules.model.AtomConstant
 
AtomDConstant - Class in com.clarkparsia.pellet.rules.model
Title: Atom Data Constant
AtomDConstant(ATermAppl) - Constructor for class com.clarkparsia.pellet.rules.model.AtomDConstant
 
AtomDObject - Interface in com.clarkparsia.pellet.rules.model
Title: Atom Data Object
AtomDVariable - Class in com.clarkparsia.pellet.rules.model
Title: Atom Data Variable
AtomDVariable(String) - Constructor for class com.clarkparsia.pellet.rules.model.AtomDVariable
 
atomic(Node, DependencySet) - Static method in class org.mindswap.pellet.Clash
 
atomic(Node, DependencySet, ATermAppl) - Static method in class org.mindswap.pellet.Clash
 
AtomicDatatype - Interface in org.mindswap.pellet.datatypes
 
atomicExplanation() - Method in class org.mindswap.pellet.Clash
 
AtomIConstant - Class in com.clarkparsia.pellet.rules.model
Title: Atom Instance Constant
AtomIConstant(ATermAppl) - Constructor for class com.clarkparsia.pellet.rules.model.AtomIConstant
 
AtomIObject - Interface in com.clarkparsia.pellet.rules.model
Title: Atom Individual Object
AtomIVariable - Class in com.clarkparsia.pellet.rules.model
Title: Atom Instance Variable
AtomIVariable(String) - Constructor for class com.clarkparsia.pellet.rules.model.AtomIVariable
 
AtomList - Static variable in class org.mindswap.pellet.jena.vocabulary.SWRL
 
AtomObject - Interface in com.clarkparsia.pellet.rules.model
Title: Atom Object
AtomObjectVisitor - Interface in com.clarkparsia.pellet.rules.model
Title: Atom Object Visitor
atoms(SWRLAtom<?>...) - Static method in class com.clarkparsia.owlapi.SWRL
 
atoms(SWRLAtom...) - Static method in class com.clarkparsia.owlapiv3.SWRL
 
AtomVariable - Class in com.clarkparsia.pellet.rules.model
Title: Atom Variable
AtomVariable(String) - Constructor for class com.clarkparsia.pellet.rules.model.AtomVariable
 
attachTemporaryGraph(Graph) - Method in class org.mindswap.pellet.jena.PelletInfGraph
 
ATTRIBUTE - Static variable in class org.mindswap.pellet.dig.DIGConstants
 
avg(ATermAppl) - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgClassesPerInstance(boolean) - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgComplementClasses() - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgDifferentsPerInstance() - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgDirectInstancesPerClass() - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgDisjointClasses() - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgEquivClasses() - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgEquivProperties() - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgInstancesPerClass(boolean) - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgInverseProperties() - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgPairsPerProperty() - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgSamesPerInstance() - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgSubClasses(boolean) - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgSubjectsPerProperty() - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgSubProperties(boolean) - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgSuperClasses(boolean) - Method in class org.mindswap.pellet.utils.SizeEstimate
 
avgSuperProperties(boolean) - Method in class org.mindswap.pellet.utils.SizeEstimate
 
Axiom - Static variable in class org.mindswap.pellet.jena.vocabulary.OWL2
 
AXIOM_FUN - Static variable in class org.mindswap.pellet.utils.ATermUtils
Set of all axiom functors used in explanations
AxiomBasedModuleExtractor - Class in com.clarkparsia.modularity
Title:
AxiomBasedModuleExtractor() - Constructor for class com.clarkparsia.modularity.AxiomBasedModuleExtractor
 
AxiomBasedModuleExtractor(LocalityClass) - Constructor for class com.clarkparsia.modularity.AxiomBasedModuleExtractor
 
AxiomBasedModuleExtractor(LocalityEvaluator) - Constructor for class com.clarkparsia.modularity.AxiomBasedModuleExtractor
 
AxiomConverter - Class in com.clarkparsia.pellet.owlapiv3
Title: AxiomConverter
AxiomConverter(PelletReasoner) - Constructor for class com.clarkparsia.pellet.owlapiv3.AxiomConverter
 
AxiomConverter(KnowledgeBase, OWLDataFactory) - Constructor for class com.clarkparsia.pellet.owlapiv3.AxiomConverter
 
AxiomConverter - Class in org.mindswap.pellet.jena.graph.converter
Title:
AxiomConverter(KnowledgeBase, Graph) - Constructor for class org.mindswap.pellet.jena.graph.converter.AxiomConverter
 
AxiomConverter - Class in org.mindswap.pellet.owlapi
Title: AxiomConverter
AxiomConverter(KnowledgeBase, OWLDataFactory) - Constructor for class org.mindswap.pellet.owlapi.AxiomConverter
 
AxiomLintPattern - Class in com.clarkparsia.pellint.lintpattern.axiom
Title: Axiom-based Lint Pattern Abstract Class
AxiomLintPattern() - Constructor for class com.clarkparsia.pellint.lintpattern.axiom.AxiomLintPattern
 

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Copyright © 2004 Evren Sirin. All Rights Reserved.